Response to RIP in ww-lig
deviations averaged over the 10th ps of simulation
background temperature = 300k
rotational temperature = 300k
significant response defined by Cα-RMSD deviation > 6 Å
PDB accession code: 1I5H
column = Cα-RMSD response to a RIP simulation
|
susceptibility of response to RIP of neighbors
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no. of responding residues for each RIP
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averaged Cα-RMSD fluctuations above background
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Last snapshot of trajectory where Cα-RMSD is
indicated by redness and thickness of chain.
SER-2 [451]
VAL-4 [453]
ASP-5 [454]
SER-6 [455]
ASN-7 [456]
ASP-8 [457]
LEU-9 [458]
LEU-12 [461]
TRP-16 [465]
GLU-17 [466]
GLU-18 [467]
ARG-19 [468]
THR-20 [469]
HIS-21 [470]
THR-22 [471]
ASP-23 [472]
ARG-25 [474]
VAL-26 [475]
PHE-27 [476]
PHE-28 [477]
ILE-29 [478]
ASN-30 [479]
HIS-31 [480]
ASN-32 [481]
ILE-33 [482]
LYS-34 [483]
LYS-35 [484]
THR-36 [485]
GLN-37 [486]
TRP-38 [487]
GLU-39 [488]
ASP-40 [489]
ARG-42 [491]
MET-43 [492]
GLN-44 [493]
ASN-45 [494]
VAL-46 [495]
ILE-48 [497]
THR-49 [498]
SER-52 [606]
THR-53 [607]
LEU-54 [608]
ILE-56 [610]
THR-59 [613]
ASN-63 [617]
TYR-64 [618]
ASP-65 [619]
SER-66 [620]
LEU-67 [621]
