Response to RIP in tim-open
deviations averaged over the 10th ps of simulation
background temperature = 300k
rotational temperature = 300k
significant response defined by Cα-RMSD deviation > 6 Å
PDB accession code: 8TIM
column = Cα-RMSD response to a RIP simulation
|
susceptibility of response to RIP of neighbors
|
no. of responding residues for each RIP
|
averaged Cα-RMSD fluctuations above background
|
Last snapshot of trajectory where Cα-RMSD is
indicated by redness and thickness of chain.
ARG-3 [4]
LYS-4 [5]
PHE-5 [6]
PHE-6 [7]
VAL-7 [8]
ASN-10 [11]
TRP-11 [12]
LYS-12 [13]
MET-13 [14]
ASN-14 [15]
ASP-16 [17]
LYS-17 [18]
LYS-18 [19]
SER-19 [20]
LEU-20 [21]
GLU-22 [23]
LEU-23 [24]
ILE-24 [25]
HIS-25 [26]
THR-26 [27]
LEU-27 [28]
ASN-28 [29]
LYS-31 [32]
LEU-32 [33]
SER-33 [34]
ASP-35 [36]
THR-36 [37]
GLU-37 [38]
VAL-38 [39]
VAL-39 [40]
CYS-40 [41]
SER-44 [45]
ILE-45 [46]
TYR-46 [47]
LEU-47 [48]
ASP-48 [49]
PHE-49 [50]
ARG-51 [52]
GLN-52 [53]
LYS-53 [54]
LEU-54 [55]
ASP-55 [56]
LYS-57 [58]
ILE-58 [59]
VAL-60 [61]
GLN-63 [64]
ASN-64 [65]
CYS-65 [66]
TYR-66 [67]
LYS-67 [68]
VAL-68 [69]
LYS-70 [71]
PHE-73 [74]
THR-74 [75]
GLU-76 [77]
ILE-77 [78]
SER-78 [79]
MET-81 [82]
ILE-82 [83]
LYS-83 [84]
ASP-84 [85]
ILE-85 [86]
TRP-89 [90]
VAL-90 [91]
ILE-91 [92]
LEU-92 [93]
HIS-94 [95]
SER-95 [96]
GLU-96 [97]
ARG-97 [98]
ARG-98 [99]
HIS-99 [100]
VAL-100 [101]
PHE-101 [102]
GLU-103 [104]
SER-104 [105]
ASP-105 [106]
GLU-106 [107]
LEU-107 [108]
ILE-108 [109]
GLN-110 [111]
LYS-111 [112]
VAL-112 [113]
HIS-114 [115]
LEU-116 [117]
GLU-118 [119]
LEU-120 [121]
VAL-122 [123]
ILE-123 [124]
CYS-125 [126]
ILE-126 [127]
GLU-128 [129]
LYS-129 [130]
LEU-130 [131]
ASP-131 [132]
GLU-132 [133]
ARG-133 [134]
GLU-134 [135]
ILE-137 [138]
THR-138 [139]
GLU-139 [140]
LYS-140 [141]
VAL-141 [142]
VAL-142 [143]
PHE-143 [144]
GLU-144 [145]
GLN-145 [146]
THR-146 [147]
LYS-147 [148]
ILE-149 [150]
ASP-151 [152]
ASN-152 [153]
VAL-153 [154]
LYS-154 [155]
ASP-155 [156]
TRP-156 [157]
SER-157 [158]
LYS-158 [159]
VAL-159 [160]
VAL-160 [161]
LEU-161 [162]
TYR-163 [164]
GLU-164 [165]
VAL-166 [167]
TRP-167 [168]
ILE-169 [170]
THR-171 [172]
LYS-173 [174]
THR-174 [175]
THR-176 [177]
GLN-178 [179]
GLN-179 [180]
GLN-181 [182]
GLU-182 [183]
VAL-183 [184]
HIS-184 [185]
GLU-185 [186]
LYS-186 [187]
LEU-187 [188]
ARG-188 [189]
TRP-190 [191]
LEU-191 [192]
LYS-192 [193]
THR-193 [194]
HIS-194 [195]
VAL-195 [196]
SER-196 [197]
ASP-197 [198]
VAL-199 [200]
GLN-201 [202]
SER-202 [203]
THR-203 [204]
ARG-204 [205]
ILE-205 [206]
ILE-206 [207]
TYR-207 [208]
SER-210 [211]
VAL-211 [212]
THR-212 [213]
ASN-215 [216]
CYS-216 [217]
LYS-217 [218]
GLU-218 [219]
LEU-219 [220]
SER-221 [222]
GLN-222 [223]
HIS-223 [224]
ASP-224 [225]
VAL-225 [226]
ASP-226 [227]
PHE-228 [229]
LEU-229 [230]
VAL-230 [231]
SER-234 [235]
LEU-235 [236]
LYS-236 [237]
GLU-238 [239]
PHE-239 [240]
VAL-240 [241]
ASP-241 [242]
ILE-242 [243]
ILE-243 [244]
ASN-244 [245]
LYS-246 [247]
HIS-247 [248]
