Rotamerically Induced PerturbationsLarge perturbations
Response to RIP in sex-lethal
deviations averaged over the 10th ps of simulation
background temperature = 300k
rotational temperature = 300k
significant response defined by Cα-RMSD deviation > 6 Å
column = Cα-RMSD response to a RIP simulation
susceptibility of response to RIP of neighbors
no. of responding residues for each RIP
averaged Cα-RMSD fluctuations above background


Last snapshot of trajectory where Cα-RMSD is indicated by redness and thickness of chain.
ASN-1
THR-2
ASN-3
LEU-4
ILE-5
VAL-6
ASN-7
TYR-8
LEU-9
GLN-11
ASP-12
MET-13
THR-14
ASP-15
ARG-16
GLU-17
LEU-18
TYR-19
LEU-21
PHE-22
ARG-23
ILE-25
ILE-28
ASN-29
THR-30
CYS-31
ARG-32
ILE-33
MET-34
ARG-35
ASP-36
TYR-37
LYS-38
THR-39
TYR-41
SER-42
PHE-43
TYR-45
PHE-47
VAL-48
ASP-49
PHE-50
THR-51
SER-52
GLU-53
MET-54
ASP-55
SER-56
GLN-57
ARG-58
ILE-60
LYS-61
VAL-62
LEU-63
ASN-64
ILE-66
THR-67
VAL-68
ARG-69
ASN-70
LYS-71
ARG-72
LEU-73
LYS-74
VAL-75
SER-76
TYR-77
ARG-79