Response to RIP in psd95-pdz3
deviations averaged over the 10th ps of simulation
background temperature = 300k
rotational temperature = 300k
significant response defined by Cα-RMSD deviation > 6 Å
PDB accession code: 1BFE
column = Cα-RMSD response to a RIP simulation
|
susceptibility of response to RIP of neighbors
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no. of responding residues for each RIP
|
averaged Cα-RMSD fluctuations above background
|
Last snapshot of trajectory where Cα-RMSD is
indicated by redness and thickness of chain.
ASP-1 [306]
ILE-2 [307]
ARG-4 [309]
GLU-5 [310]
ARG-7 [312]
ARG-8 [313]
ILE-9 [314]
VAL-10 [315]
ILE-11 [316]
HIS-12 [317]
ARG-13 [318]
SER-15 [320]
THR-16 [321]
LEU-18 [323]
PHE-20 [325]
ASN-21 [326]
ILE-22 [327]
ILE-23 [328]
GLU-26 [331]
ASP-27 [332]
GLU-29 [334]
ILE-31 [336]
PHE-32 [337]
ILE-33 [338]
SER-34 [339]
PHE-35 [340]
ILE-36 [341]
LEU-37 [342]
ASP-43 [348]
LEU-44 [349]
SER-45 [350]
GLU-47 [352]
LEU-48 [353]
ARG-49 [354]
LYS-50 [355]
ASP-52 [357]
GLN-53 [358]
ILE-54 [359]
LEU-55 [360]
SER-56 [361]
VAL-57 [362]
ASN-58 [363]
VAL-60 [365]
ASP-61 [366]
LEU-62 [367]
ARG-63 [368]
ASN-64 [369]
SER-66 [371]
HIS-67 [372]
GLU-68 [373]
GLN-69 [374]
ILE-72 [377]
LEU-74 [379]
LYS-75 [380]
ASN-76 [381]
GLN-79 [384]
THR-80 [385]
VAL-81 [386]
THR-82 [387]
ILE-83 [388]
ILE-84 [389]
GLN-86 [391]
TYR-87 [392]
LYS-88 [393]
GLU-90 [395]
GLU-91 [396]
TYR-92 [397]
SER-93 [398]
ARG-94 [399]
PHE-95 [400]
GLU-96 [401]
ASN-98 [403]
SER-99 [404]
ARG-100 [405]
VAL-101 [406]
ASN-102 [407]
SER-103 [408]
SER-104 [409]
ARG-106 [411]
ILE-107 [412]
VAL-108 [413]
THR-109 [414]
ASN-110 [415]
