Response to RIP in protein-g
deviations averaged over the 10th ps of simulation
background temperature = 300k
rotational temperature = 300k
significant response defined by Cα-RMSD deviation > 6 Å
PDB accession code: 1GB1
column = Cα-RMSD response to a RIP simulation
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susceptibility of response to RIP of neighbors
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no. of responding residues for each RIP
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averaged Cα-RMSD fluctuations above background
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Last snapshot of trajectory where Cα-RMSD is
indicated by redness and thickness of chain.
MET-1 [1]
THR-2 [2]
TYR-3 [3]
LYS-4 [4]
LEU-5 [5]
ILE-6 [6]
LEU-7 [7]
ASN-8 [8]
LYS-10 [10]
THR-11 [11]
LEU-12 [12]
LYS-13 [13]
GLU-15 [15]
THR-16 [16]
THR-17 [17]
THR-18 [18]
GLU-19 [19]
VAL-21 [21]
ASP-22 [22]
THR-25 [25]
GLU-27 [27]
LYS-28 [28]
VAL-29 [29]
PHE-30 [30]
LYS-31 [31]
GLN-32 [32]
TYR-33 [33]
ASN-35 [35]
ASP-36 [36]
ASN-37 [37]
VAL-39 [39]
ASP-40 [40]
GLU-42 [42]
TRP-43 [43]
THR-44 [44]
TYR-45 [45]
ASP-46 [46]
ASP-47 [47]
THR-49 [49]
LYS-50 [50]
THR-51 [51]
PHE-52 [52]
THR-53 [53]
VAL-54 [54]
THR-55 [55]
GLU-56 [56]
