Response to RIP in ntrc-ph
deviations averaged over the 10th ps of simulation
background temperature = 300k
rotational temperature = 300k
significant response defined by Cα-RMSD deviation > 6 Å
PDB accession code: 1DC8
column = Cα-RMSD response to a RIP simulation
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susceptibility of response to RIP of neighbors
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no. of responding residues for each RIP
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averaged Cα-RMSD fluctuations above background
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Last snapshot of trajectory where Cα-RMSD is
indicated by redness and thickness of chain.
MET-1 [1]
GLN-2 [2]
ARG-3 [3]
ILE-5 [5]
VAL-6 [6]
TRP-7 [7]
VAL-8 [8]
VAL-9 [9]
ASP-10 [10]
ASP-11 [11]
ASP-12 [12]
SER-13 [13]
SER-14 [14]
ILE-15 [15]
ARG-16 [16]
TRP-17 [17]
VAL-18 [18]
LEU-19 [19]
GLU-20 [20]
ARG-21 [21]
LEU-23 [23]
LEU-28 [28]
THR-29 [29]
CYS-30 [30]
THR-31 [31]
THR-32 [32]
PHE-33 [33]
GLU-34 [34]
ASN-35 [35]
ASN-37 [37]
GLU-38 [38]
VAL-39 [39]
LEU-40 [40]
LEU-43 [43]
SER-45 [45]
LYS-46 [46]
THR-47 [47]
ASP-49 [49]
VAL-50 [50]
LEU-51 [51]
LEU-52 [52]
SER-53 [53]
ILE-55 [55]
ARG-56 [56]
MET-57 [57]
MET-60 [60]
ASP-61 [61]
LEU-63 [63]
LEU-65 [65]
LEU-66 [66]
LYS-67 [67]
GLN-68 [68]
ILE-69 [69]
LYS-70 [70]
GLN-71 [71]
ARG-72 [72]
HIS-73 [73]
MET-75 [75]
LEU-76 [76]
VAL-78 [78]
ILE-79 [79]
ILE-80 [80]
MET-81 [81]
THR-82 [82]
HIS-84 [84]
SER-85 [85]
ASP-86 [86]
LEU-87 [87]
ASP-88 [88]
VAL-91 [91]
SER-92 [92]
TYR-94 [94]
GLN-95 [95]
GLN-96 [96]
PHE-99 [99]
ASP-100 [100]
TYR-101 [101]
LEU-102 [102]
LYS-104 [104]
PHE-106 [106]
ASP-107 [107]
ILE-108 [108]
ASP-109 [109]
GLU-110 [110]
VAL-112 [112]
LEU-114 [114]
VAL-115 [115]
GLU-116 [116]
ARG-117 [117]
ILE-119 [119]
SER-120 [120]
HIS-121 [121]
TYR-122 [122]
GLN-123 [123]
GLU-124 [124]
