Response to RIP in kinesin
deviations averaged over the 10th ps of simulation
background temperature = 300k
rotational temperature = 300k
significant response defined by Cα-RMSD deviation > 6 Å
PDB accession code: 1V8K
column = Cα-RMSD response to a RIP simulation
|
susceptibility of response to RIP of neighbors
|
no. of responding residues for each RIP
|
averaged Cα-RMSD fluctuations above background
|
Last snapshot of trajectory where Cα-RMSD is
indicated by redness and thickness of chain.
ASN-2 [43]
TRP-3 [44]
GLU-4 [45]
PHE-5 [46]
ARG-7 [48]
MET-8 [49]
ILE-9 [50]
LYS-10 [51]
GLU-11 [52]
PHE-12 [53]
ARG-13 [54]
VAL-14 [55]
THR-15 [56]
MET-16 [57]
GLU-17 [58]
CYS-18 [59]
SER-19 [60]
LEU-21 [62]
THR-22 [63]
VAL-23 [64]
THR-24 [65]
ASP-25 [66]
ILE-27 [68]
GLU-28 [69]
GLU-29 [70]
HIS-30 [71]
ARG-31 [72]
ILE-32 [73]
CYS-33 [74]
VAL-34 [75]
CYS-35 [76]
VAL-36 [77]
ARG-37 [78]
LYS-38 [79]
ARG-39 [80]
LEU-41 [82]
ASN-42 [83]
LYS-43 [84]
GLN-44 [85]
GLU-45 [86]
LEU-46 [87]
LYS-48 [89]
LYS-49 [90]
GLU-50 [91]
ILE-51 [92]
ASP-52 [93]
VAL-53 [94]
ILE-54 [95]
SER-55 [96]
VAL-56 [97]
SER-58 [99]
LYS-59 [100]
CYS-60 [101]
LEU-61 [102]
LEU-62 [103]
LEU-63 [104]
VAL-64 [105]
HIS-65 [106]
GLU-66 [107]
LYS-68 [109]
LEU-69 [110]
LYS-70 [111]
VAL-71 [112]
ASP-72 [113]
LEU-73 [114]
THR-74 [115]
LYS-75 [116]
TYR-76 [117]
LEU-77 [118]
GLU-78 [119]
ASN-79 [120]
GLN-80 [121]
PHE-82 [123]
CYS-83 [124]
PHE-84 [125]
ASP-85 [126]
PHE-86 [127]
PHE-88 [129]
ASP-89 [130]
GLU-90 [131]
THR-91 [132]
SER-93 [134]
ASN-94 [135]
GLU-95 [136]
VAL-96 [137]
VAL-97 [138]
TYR-98 [139]
ARG-99 [140]
PHE-100 [141]
THR-101 [142]
ARG-103 [144]
LEU-105 [146]
VAL-106 [147]
GLN-107 [148]
THR-108 [149]
ILE-109 [150]
PHE-110 [151]
GLU-111 [152]
LYS-114 [155]
THR-116 [157]
CYS-117 [158]
PHE-118 [159]
TYR-120 [161]
GLN-122 [163]
THR-123 [164]
SER-125 [166]
LYS-127 [168]
THR-128 [169]
HIS-129 [170]
THR-130 [171]
MET-131 [172]
ASP-134 [175]
LEU-135 [176]
GLN-136 [181]
ASN-137 [182]
SER-139 [184]
LYS-140 [185]
ILE-142 [187]
TYR-143 [188]
MET-145 [190]
SER-147 [192]
ARG-148 [193]
ASP-149 [194]
VAL-150 [195]
PHE-151 [196]
LEU-152 [197]
LEU-153 [198]
LYS-154 [199]
ASN-155 [200]
GLN-156 [201]
ARG-158 [203]
TYR-159 [204]
ARG-160 [205]
ASN-161 [206]
LEU-162 [207]
ASN-163 [208]
LEU-164 [209]
GLU-165 [210]
VAL-166 [211]
TYR-167 [212]
VAL-168 [213]
THR-169 [214]
PHE-170 [215]
PHE-171 [216]
GLU-172 [217]
ILE-173 [218]
TYR-174 [219]
ASN-175 [220]
LYS-177 [222]
VAL-178 [223]
PHE-179 [224]
ASP-180 [225]
LEU-181 [226]
LEU-182 [227]
ASN-183 [228]
LYS-184 [229]
LYS-185 [230]
LYS-187 [232]
LEU-188 [233]
ARG-189 [234]
VAL-190 [235]
LEU-191 [236]
GLU-192 [237]
ASP-193 [238]
SER-194 [239]
ARG-195 [240]
GLN-196 [241]
GLN-197 [242]
VAL-198 [243]
GLN-199 [244]
VAL-200 [245]
VAL-201 [246]
LEU-203 [248]
GLN-204 [249]
GLU-205 [250]
TYR-206 [251]
LEU-207 [252]
VAL-208 [253]
THR-209 [254]
CYS-210 [255]
ASP-212 [257]
ASP-213 [258]
VAL-214 [259]
ILE-215 [260]
LYS-216 [261]
MET-217 [262]
ILE-218 [263]
ASN-219 [264]
MET-220 [265]
SER-222 [267]
CYS-224 [269]
ARG-225 [270]
THR-226 [271]
ASN-227 [280]
SER-228 [281]
SER-229 [282]
ARG-230 [283]
SER-231 [284]
HIS-232 [285]
CYS-234 [287]
PHE-235 [288]
GLN-236 [289]
ILE-237 [290]
LEU-238 [291]
LEU-239 [292]
ARG-240 [293]
THR-241 [294]
LYS-242 [295]
ARG-244 [297]
LEU-245 [298]
HIS-246 [299]
LYS-248 [301]
PHE-249 [302]
SER-250 [303]
LEU-251 [304]
VAL-252 [305]
ASP-253 [306]
LEU-254 [307]
ASN-257 [310]
GLU-258 [311]
ARG-259 [324]
MET-260 [325]
GLU-261 [326]
GLU-264 [329]
ILE-265 [330]
ASN-266 [331]
LYS-267 [332]
SER-268 [333]
LEU-269 [334]
LEU-270 [335]
LEU-272 [337]
LYS-273 [338]
GLU-274 [339]
CYS-275 [340]
ILE-276 [341]
ARG-277 [342]
LEU-279 [344]
GLN-281 [346]
PHE-282 [353]
ARG-283 [354]
GLU-284 [355]
SER-285 [356]
LYS-286 [357]
LEU-287 [358]
THR-288 [359]
GLN-289 [360]
VAL-290 [361]
LEU-291 [362]
ARG-292 [363]
ASP-293 [364]
SER-294 [365]
PHE-295 [366]
ILE-296 [367]
GLU-298 [369]
ASN-299 [370]
SER-300 [371]
ARG-301 [372]
THR-302 [373]
CYS-303 [374]
MET-304 [375]
ILE-305 [376]
MET-307 [378]
ILE-308 [379]
SER-309 [380]
ILE-312 [383]
SER-313 [384]
SER-314 [385]
CYS-315 [386]
GLU-316 [387]
TYR-317 [388]
THR-318 [389]
LEU-319 [390]
ASN-320 [391]
THR-321 [392]
LEU-322 [393]
ARG-323 [394]
TYR-324 [395]
ASP-326 [397]
ARG-327 [398]
VAL-328 [399]
LYS-329 [400]
GLU-330 [401]
LEU-331 [402]
SER-332 [403]
