Rotamerically Induced PerturbationsLarge perturbations
Response to RIP in gluco-recep
deviations averaged over the 10th ps of simulation
background temperature = 300k
rotational temperature = 300k
significant response defined by Cα-RMSD deviation > 6 Å
PDB accession code: 1M2Z
column = Cα-RMSD response to a RIP simulation
susceptibility of response to RIP of neighbors
no. of responding residues for each RIP
averaged Cα-RMSD fluctuations above background


Last snapshot of trajectory where Cα-RMSD is indicated by redness and thickness of chain.
THR-2 [524]
LEU-3 [525]
GLN-5 [527]
LEU-6 [528]
THR-7 [529]
THR-9 [531]
LEU-10 [532]
VAL-11 [533]
SER-12 [534]
LEU-13 [535]
LEU-14 [536]
GLU-15 [537]
VAL-16 [538]
ILE-17 [539]
GLU-18 [540]
GLU-20 [542]
VAL-21 [543]
LEU-22 [544]
TYR-23 [545]
TYR-26 [548]
ASP-27 [549]
SER-28 [550]
SER-29 [551]
VAL-30 [552]
ASP-32 [554]
SER-33 [555]
THR-34 [556]
TRP-35 [557]
ARG-36 [558]
ILE-37 [559]
MET-38 [560]
THR-39 [561]
THR-40 [562]
LEU-41 [563]
ASN-42 [564]
MET-43 [565]
LEU-44 [566]
ARG-47 [569]
GLN-48 [570]
VAL-49 [571]
ILE-50 [572]
VAL-53 [575]
LYS-54 [576]
TRP-55 [577]
LYS-57 [579]
ILE-59 [581]
PHE-62 [584]
ARG-63 [585]
ASN-64 [586]
LEU-65 [587]
HIS-66 [588]
LEU-67 [589]
ASP-68 [590]
ASP-69 [591]
GLN-70 [592]
MET-71 [593]
THR-72 [594]
LEU-73 [595]
LEU-74 [596]
GLN-75 [597]
TYR-76 [598]
SER-77 [599]
TRP-78 [600]
MET-79 [601]
SER-80 [602]
LEU-81 [603]
MET-82 [604]
PHE-84 [606]
LEU-86 [608]
TRP-88 [610]
ARG-89 [611]
SER-90 [612]
TYR-91 [613]
ARG-92 [614]
GLN-93 [615]
SER-94 [616]
SER-95 [617]
ASN-97 [619]
LEU-98 [620]
LEU-99 [621]
CYS-100 [622]
PHE-101 [623]
ASP-104 [626]
LEU-105 [627]
ILE-106 [628]
ILE-107 [629]
ASN-108 [630]
GLU-109 [631]
GLN-110 [632]
ARG-111 [633]
MET-112 [634]
THR-113 [635]
LEU-114 [636]
CYS-116 [638]
MET-117 [639]
TYR-118 [640]
ASP-119 [641]
GLN-120 [642]
CYS-121 [643]
LYS-122 [644]
HIS-123 [645]
MET-124 [646]
LEU-125 [647]
TYR-126 [648]
VAL-127 [649]
SER-128 [650]
SER-129 [651]
GLU-130 [652]
LEU-131 [653]
HIS-132 [654]
ARG-133 [655]
LEU-134 [656]
GLN-135 [657]
VAL-136 [658]
SER-137 [659]
TYR-138 [660]
GLU-139 [661]
GLU-140 [662]
TYR-141 [663]
LEU-142 [664]
CYS-143 [665]
MET-144 [666]
LYS-145 [667]
THR-146 [668]
LEU-147 [669]
LEU-148 [670]
LEU-149 [671]
LEU-150 [672]
SER-151 [673]
SER-152 [674]
VAL-153 [675]
LYS-155 [677]
ASP-156 [678]
LEU-158 [680]
LYS-159 [681]
SER-160 [682]
GLN-161 [683]
GLU-162 [684]
LEU-163 [685]
PHE-164 [686]
ASP-165 [687]
GLU-166 [688]
ILE-167 [689]
ARG-168 [690]
MET-169 [691]
THR-170 [692]
TYR-171 [693]
ILE-172 [694]
LYS-173 [695]
GLU-174 [696]
LEU-175 [697]
LYS-177 [699]
ILE-179 [701]
VAL-180 [702]
LYS-181 [703]
ARG-182 [704]
GLU-183 [705]
ASN-185 [707]
SER-186 [708]
SER-187 [709]
GLN-188 [710]
ASN-189 [711]
TRP-190 [712]
GLN-191 [713]
ARG-192 [714]
PHE-193 [715]
TYR-194 [716]
GLN-195 [717]
LEU-196 [718]
THR-197 [719]
LYS-198 [720]
LEU-199 [721]
LEU-200 [722]
ASP-201 [723]
SER-202 [724]
MET-203 [725]
HIS-204 [726]
GLU-205 [727]
VAL-206 [728]
VAL-207 [729]
GLU-208 [730]
ASN-209 [731]
LEU-210 [732]
LEU-211 [733]
ASN-212 [734]
TYR-213 [735]
CYS-214 [736]
PHE-215 [737]
GLN-216 [738]
THR-217 [739]
PHE-218 [740]
LEU-219 [741]
ASP-220 [742]
LYS-221 [743]
THR-222 [744]
MET-223 [745]
SER-224 [746]
ILE-225 [747]
GLU-226 [748]
PHE-227 [749]
GLU-229 [751]
MET-230 [752]
LEU-231 [753]
GLU-233 [755]
ILE-234 [756]
ILE-235 [757]
THR-236 [758]
ASN-237 [759]
GLN-238 [760]
ILE-239 [761]
LYS-241 [763]
TYR-242 [764]
SER-243 [765]
ASN-244 [766]
ASN-246 [768]
ILE-247 [769]
LYS-248 [770]
LYS-249 [771]
LEU-250 [772]
LEU-251 [773]
PHE-252 [774]
HIS-253 [775]
GLN-254 [776]
LYS-255 [777]