Response to RIP in ebola-gp2
deviations averaged over the 10th ps of simulation
background temperature = 300k
rotational temperature = 300k
significant response defined by Cα-RMSD deviation > 6 Å
PDB accession code: 2EBO
column = Cα-RMSD response to a RIP simulation
|
susceptibility of response to RIP of neighbors
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no. of responding residues for each RIP
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averaged Cα-RMSD fluctuations above background
|
Last snapshot of trajectory where Cα-RMSD is
indicated by redness and thickness of chain.
LEU-2 [558]
ARG-3 [559]
GLN-4 [560]
LEU-5 [561]
ASN-7 [563]
GLU-8 [564]
THR-9 [565]
THR-10 [566]
GLN-11 [567]
LEU-13 [569]
GLN-14 [570]
LEU-15 [571]
PHE-16 [572]
LEU-17 [573]
ARG-18 [574]
THR-20 [576]
THR-21 [577]
GLU-22 [578]
LEU-23 [579]
ARG-24 [580]
THR-25 [581]
PHE-26 [582]
SER-27 [583]
ILE-28 [584]
LEU-29 [585]
ASN-30 [586]
ARG-31 [587]
LYS-32 [588]
ILE-34 [590]
ASP-35 [591]
PHE-36 [592]
LEU-37 [593]
LEU-38 [594]
GLN-39 [595]
ARG-40 [596]
TRP-41 [597]
THR-44 [600]
CYS-45 [601]
HIS-46 [602]
ILE-47 [603]
LEU-48 [604]
ASP-51 [607]
CYS-52 [608]
ILE-54 [610]
GLU-55 [611]
HIS-57 [613]
ASP-58 [614]
THR-60 [616]
LYS-61 [617]
ASN-62 [618]
ILE-63 [619]
THR-64 [620]
ASP-65 [621]
LYS-66 [622]
ILE-67 [623]
ASP-68 [624]
GLN-69 [625]
ILE-70 [626]
ILE-71 [627]
HIS-72 [628]
PHE-74 [630]
