Rotamerically Induced PerturbationsLarge perturbations
Response to RIP in androgen-recep
deviations averaged over the 10th ps of simulation
background temperature = 300k
rotational temperature = 300k
significant response defined by Cα-RMSD deviation > 6 Å
PDB accession code: 1T7T
column = Cα-RMSD response to a RIP simulation
susceptibility of response to RIP of neighbors
no. of responding residues for each RIP
averaged Cα-RMSD fluctuations above background


Last snapshot of trajectory where Cα-RMSD is indicated by redness and thickness of chain.
CYS-1 [669]
GLN-2 [670]
ILE-4 [672]
PHE-5 [673]
LEU-6 [674]
ASN-7 [675]
VAL-8 [676]
LEU-9 [677]
GLU-10 [678]
ILE-12 [680]
GLU-13 [681]
VAL-16 [684]
VAL-17 [685]
CYS-18 [686]
HIS-21 [689]
ASP-22 [690]
ASN-23 [691]
ASN-24 [692]
GLN-25 [693]
ASP-27 [695]
SER-28 [696]
PHE-29 [697]
LEU-32 [700]
LEU-33 [701]
SER-34 [702]
SER-35 [703]
LEU-36 [704]
ASN-37 [705]
GLU-38 [706]
LEU-39 [707]
GLU-41 [709]
ARG-42 [710]
GLN-43 [711]
LEU-44 [712]
VAL-45 [713]
HIS-46 [714]
VAL-47 [715]
VAL-48 [716]
LYS-49 [717]
TRP-50 [718]
LYS-52 [720]
LEU-54 [722]
PHE-57 [725]
ARG-58 [726]
ASN-59 [727]
LEU-60 [728]
HIS-61 [729]
VAL-62 [730]
ASP-63 [731]
ASP-64 [732]
GLN-65 [733]
MET-66 [734]
VAL-68 [736]
ILE-69 [737]
GLN-70 [738]
TYR-71 [739]
SER-72 [740]
TRP-73 [741]
MET-74 [742]
LEU-76 [744]
MET-77 [745]
VAL-78 [746]
PHE-79 [747]
MET-81 [749]
TRP-83 [751]
ARG-84 [752]
SER-85 [753]
PHE-86 [754]
THR-87 [755]
ASN-88 [756]
VAL-89 [757]
ASN-90 [758]
SER-91 [759]
ARG-92 [760]
MET-93 [761]
LEU-94 [762]
TYR-95 [763]
PHE-96 [764]
ASP-99 [767]
LEU-100 [768]
VAL-101 [769]
PHE-102 [770]
ASN-103 [771]
GLU-104 [772]
TYR-105 [773]
ARG-106 [774]
MET-107 [775]
HIS-108 [776]
LYS-109 [777]
SER-110 [778]
ARG-111 [779]
MET-112 [780]
TYR-113 [781]
SER-114 [782]
GLN-115 [783]
CYS-116 [784]
VAL-117 [785]
ARG-118 [786]
MET-119 [787]
ARG-120 [788]
HIS-121 [789]
LEU-122 [790]
SER-123 [791]
GLN-124 [792]
GLU-125 [793]
PHE-126 [794]
TRP-128 [796]
LEU-129 [797]
GLN-130 [798]
ILE-131 [799]
THR-132 [800]
GLN-134 [802]
GLU-135 [803]
PHE-136 [804]
LEU-137 [805]
CYS-138 [806]
MET-139 [807]
LYS-140 [808]
LEU-142 [810]
LEU-143 [811]
LEU-144 [812]
PHE-145 [813]
SER-146 [814]
ILE-147 [815]
ILE-148 [816]
VAL-150 [818]
ASP-151 [819]
LEU-153 [821]
LYS-154 [822]
ASN-155 [823]
GLN-156 [824]
LYS-157 [825]
PHE-158 [826]
PHE-159 [827]
ASP-160 [828]
GLU-161 [829]
LEU-162 [830]
ARG-163 [831]
MET-164 [832]
ASN-165 [833]
TYR-166 [834]
ILE-167 [835]
LYS-168 [836]
GLU-169 [837]
LEU-170 [838]
ASP-171 [839]
ARG-172 [840]
ILE-173 [841]
ILE-174 [842]
CYS-176 [844]
LYS-177 [845]
ARG-178 [846]
LYS-179 [847]
ASN-180 [848]
THR-182 [850]
SER-183 [851]
CYS-184 [852]
SER-185 [853]
ARG-186 [854]
ARG-187 [855]
PHE-188 [856]
TYR-189 [857]
GLN-190 [858]
LEU-191 [859]
THR-192 [860]
LYS-193 [861]
LEU-194 [862]
LEU-195 [863]
ASP-196 [864]
SER-197 [865]
VAL-198 [866]
GLN-199 [867]
ILE-201 [869]
ARG-203 [871]
GLU-204 [872]
LEU-205 [873]
HIS-206 [874]
GLN-207 [875]
PHE-208 [876]
THR-209 [877]
PHE-210 [878]
ASP-211 [879]
LEU-212 [880]
LEU-213 [881]
ILE-214 [882]
LYS-215 [883]
SER-216 [884]
HIS-217 [885]
MET-218 [886]
VAL-219 [887]
SER-220 [888]
VAL-221 [889]
ASP-222 [890]
PHE-223 [891]
GLU-225 [893]
MET-226 [894]
MET-227 [895]
GLU-229 [897]
ILE-230 [898]
ILE-231 [899]
SER-232 [900]
VAL-233 [901]
GLN-234 [902]
VAL-235 [903]
LYS-237 [905]
ILE-238 [906]
LEU-239 [907]
SER-240 [908]
LYS-242 [910]
VAL-243 [911]
LYS-244 [912]
ILE-246 [914]
TYR-247 [915]
PHE-248 [916]
HIS-249 [917]
THR-250 [918]