Bosco K. Ho

Postdoctoral scholar
David Agard lab
University of California San Francisco

Other stuff of mine.

Contact

Labs I've worked in

Things I Know about Proteins

Published papers

  1. Deformations induced by domain pulling forces identify key inter-domain interactions that have been conserved in bacterial proteases
    Bosco K. Ho, Brian Kelch, Pinar Erciyas Bailey, Timothy Street, Neema Salimi and David A. Agard
    Submitted.
  2. Generating accurate forces in molecular dynamics: the mechanical unfolding of titin, e2lip3 and ubiquitin
    Bosco K. Ho and David A. Agard
    Submitted.
  3. Unfolding Simulations Reveal the Mechanism of Extreme Unfolding Cooperativity in the Kinetically Stable α-Lytic Protease (2010)
    Neema L. Salimi, Bosco K. Ho and David A. Agard
    PLOS Computational Biology 6(2):e10000689 [pdf|link]
  4. Conserved Tertiary Couplings Stabilize Elements in the PDZ fold, leading to Characteristic Patterns of Domain Conformational Flexibility (2010)
    Bosco K. Ho and David A. Agard
    Protein Science 19:398-411 [pdf|link]
  5. Probing the Flexibility of Large Conformational Changes in Protein Structures through Local Perturbations (2009)
    Bosco K. Ho and David A. Agard
    PLOS Computational Biology 5(4): e1000343 [pdf|link]
  6. HOLLOW: Generating Accurate Representations of Channel and Interior Surfaces in Molecular Structures (2008)
    Bosco K. Ho and Franz Gruswitz
    BMC Structural Biology 8:49 [pdf|link]
  7. Identification of new, well-populated amino-acid sidechain rotamers involving hydroxyl-hydrogen atoms and sulfhydryl-hydrogen atoms (2008)
    Bosco K. Ho and David A Agard
    BMC Structural Biology 8:41 [pdf|link]
  8. Folding Very Short Peptides Using Molecular Dynamics (2006)
    Bosco K. Ho and Ken A. Dill
    PLoS Computational Biology 2:e27 [pdf|link]
  9. The Ramachandran plots of glycine and pre-proline (2005)
    Bosco K. Ho and Robert Brasseur
    BMC Structural Biology 5:14 [pdf|link]
  10. The flexibility in the proline ring couples to the protein backbone (2005)
    Bosco K. Ho, Evangelos A. Coutsias, Chaok Seok and Ken A. Dill
    Protein Science 14:1011 [pdf|pubmed]
  11. Revisiting the Ramachandran plot: hard-sphere repulsion, electrostatics, and H-bonding in the α-helix (2003)
    Bosco K. Ho, Annick Thomas and Robert Brasseur
    Protein Science 12:2508 [pdf|pubmed]
  12. Twist and shear in β-sheets and β-ribbons (2002)
    Bosco K. Ho, and P. M. G. Curmi
    Journal of Molecular Biology 317:291 [pdf|pubmed]